BS-seq of A.arenosa - SRA

SRX9346849: BS-seq of A.arenosa
1 ILLUMINA (HiSeq X Ten) run: 50M spots, 15G bases, 5.4Gb downloads

Design: BS-seq to get whole-genome DNA methylation

Submitted by: Nanjing Agricultural University

Study: Concerted genomic and epigenomic changes accompany stabilization of Arabidopsis allopolyploids

PRJNA669593 • SRP288237 • All experiments • All runs

We use a powerful model Arabidopsis suecica (TTAA), an allotetraploid formed between A. thaliana (TT) and A. arenosa (AA), to reveal genomic and epigenomic contributions to stability in resynthesized and natural allotetraploids. These genomic and epigenomic diversifications may reconcile intergenomic incompatibility and improve stability and adaptation during polyploid evolution.

Sample:

SAMN16456094 • SRS7569855 • All experiments • All runs

Organism: Arabidopsis arenosa

Library:

Name: Aa_BS-seq_rep1

Instrument: HiSeq X Ten

Strategy: Bisulfite-Seq

Source: GENOMIC

Selection: RANDOM PCR

Layout: PAIRED

Runs: 1 run, 50M spots, 15G bases, 5.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR12880909	50,006,701	15G	5.4Gb	2021-05-28

ID:: 12206261

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